Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0565
carbon source butyrate (C) -1.5
carbon source Valeric (C) -1.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.2
temperature Growth at 30C; with MOPS -1.1
carbon source 4-Aminobutyric 10 mM (C) -1.1
carbon source Lauric (C) -1.0
stress Growth with Chloride 500 mM; with MOPS -1.0
phage PUT8 MOI 10 -0.9
temperature shift Temperature shift 10_to_25; with MOPS -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9
nitrogen source 2,6-diaminopimelic (N) -0.9
nitrogen source D-2-Aminobutyric (N) -0.8
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8
carbon source D-Fructose (C) -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8
pH Growth at pH7 and (C) D-Glucose +0.8
carbon source 3-Hydroxydecanoic (C) +0.8
pH Growth at pH7 and (C) D-Glucose +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.9
pH Valerolactone (C) pH 6.5 +0.9
nitrogen source Urea (N) +0.9
pH pH 7 +1.0
phage P. putida Missley MOI 0.1 +1.0
pH Growth at pH7 and (C) Trisodium citrate +1.1
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PP_0565