Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0563
nitrogen source D-2-Aminobutyric (N) -0.7
stress Geraniol 1 vol% -0.7
carbon source Oleic (C) -0.7
nitrogen source nitrogen source nitrite 1mM -0.6
carbon source D-Lysine 10 mM (C) -0.5
stress Formaldehyde 0.03125 vol% -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
nitrogen source 2,6-diaminopimelic (N) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5
nitrogen source Propiolactam (N) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4
temperature shift Temperature shift 10_to_30 +0.4
temperature Growth at 30C +0.4
stress Growth with Chloride 500 mM; with MOPS +0.4
carbon source propionate (C) +0.4
stress Growth with Chloride 500 mM +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5
pH Growth at pH6 and (C) Trisodium citrate +0.5
temperature shift Temperature shift 10_to_25 +0.5
temperature shift Temperature shift 10_to_25 +0.5
stress Growth with Chloride 500 mM +0.5
carbon source Tween 20 (C) +0.5
stress Growth with Chloride 500 mM; with MOPS +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6
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PP_0563