Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_0554
carbon source	2,3-Butanediol (C)	-2.9
carbon source	2,3-Butanediol (C)	-2.2
nitrogen source	nitrite (N)	-0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
temperature	Growth at 25C; with MOPS	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.5
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	-0.4
phage	PUT 8 MOI 1	-0.4
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.4
nitrogen source	nitrate (N)	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
carbon source	carbon source Bisabolene 48.9 mM	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
phage	PUT8 MOI 0.1	-0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.4
no stress control	Growth with no stress	-0.4
carbon source	ferulate (C); with MOPS	-0.3
carbon source	Delta-Nonalactone (C)	+0.3
nitrogen source	nitrate (N)	+0.3
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.4
pH	Growth at pH7 and (C) D-Glucose	+0.4
temperature shift	Temperature shift 10_to_25; with MOPS	+0.4
carbon source	Sebacic (C)	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	+0.5
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