Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0542
nitrogen source	Ethanolamine (N)	-3.5
nitrogen source	Ethanolamine (N)	-3.0
pH	Growth at pH6 and (C) D-Glucose	-1.2
pH	pH 8	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-0.9
carbon source	Trisodium citrate (C)	-0.7
carbon source	Nonanoic (C)	-0.7
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
nitrogen source	Urea (N)	-0.5
temperature	Growth at 25C; with MOPS	-0.5
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
carbon source	3-Hydroxydecanoic (C)	-0.5
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	-0.5
carbon source	Nonanoic (C)	-0.5
carbon source	carbon source 4-vinylphenol 0.1 mM	-0.5
phage	P. putida Sci small MOI 0.1	+0.5
pH	Growth at pH6 and (C) Trisodium citrate	+0.5
nitrogen source	Ammonium chloride (N)	+0.5
nitrogen source	Propiolactam (N)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.5
temperature shift	Temperature shift 30_to_34; with MOPS	+0.5
nitrogen source	Urea (N); with MOPS	+0.5
phage	P. putida Sci small MOI 0.1	+0.6
pH	Growth at pH6 and (C) D-Glucose	+0.7
nitrogen source	2,6-diaminopimelic (N)	+0.7
nitrogen source	nitrate (N)	+0.7
pH	Growth at pH7 and (C) Trisodium citrate	+1.0
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