Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0530
pH	Growth at pH7 and (C) D-Glucose	-0.6
carbon source	Nonanoic (C)	-0.5
carbon source	ferulate (C); with MOPS	-0.5
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
nitrogen source	Propiolactam (N)	-0.5
no stress control	Growth with no stress	-0.4
phage	P. putida Missley MOI 0.1	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4
phage	P. putida South MOI 10	-0.4
nitrogen source	Propandiamine (N)	-0.4
carbon source	D-Glucose (C)	-0.4
pH	Growth at pH7 and (C) Trisodium citrate	-0.4
phage	P. putida PUT10 MOI 10	-0.4
pH	Valerolactone (C) pH 6.5	-0.4
phage	P. put South MOI 0.1	-0.4
phage	P. putida PUT 7 MOI 1	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
pH	Growth at pH9 and (C) Trisodium citrate	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
reactor	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-0.4
stress	Butyrolactam 2 vol%	-0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4
carbon source	carbon source D-Glucose 55.5 mM	+0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
		remove PP_0530