Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0481
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.9
carbon source	Lignin Monomers (C)	-0.7
carbon source	Acetate Carbon Source (5mM)	-0.7
carbon source	Lignin Monomers (C)	-0.7
nitrogen source	nitrogen source nitrite 1mM	-0.5
carbon source	Acetate Carbon Source (20mM)	-0.5
nitrogen source	nitrogen source nitrate 20mM	-0.5
carbon source	Acetate Carbon Source (5mM)	-0.5
carbon source	3-methyl-1-butanol (C)	-0.5
nitrogen source	NAG (N); with MOPS	-0.4
nitrogen source	Ammonium chloride (N)	-0.4
nitrogen source	nitrogen source Ammonium chloride 20mM	-0.4
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.4
nitrogen source	nitrogen source nitrite 1mM	-0.4
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
carbon source	Acetate Carbon Source (20mM)	-0.4
carbon source	ferulate (C); with MOPS	-0.4
phage	P. putida Sci small MOI 0.1	+0.4
carbon source	Vanillin (C)	+0.4
phage	P. putida Missley MOI 0.1	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.4
phage	P. putida Sci small MOI 0.1	+0.4
phage	P. putida South MOI 10	+0.5
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.5
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.5
phage	P. putida PUT 7 MOI 1	+0.5
stress	pinene 10 vol%	+1.6
		remove PP_0481