Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_0418
carbon source	Tween 20 (C)	-0.4
pH	pH 4	-0.3
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.3
pH	Growth at pH6 and (C) D-Glucose	-0.3
carbon source	Tween 20 (C)	-0.3
carbon source	pyruvate (C)	-0.3
pH	Growth at pH8 and (C) D-Glucose	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.2
nitrogen source	Ammonium chloride (N)	-0.2
pH	Growth at pH6 and (C) Trisodium citrate	-0.2
carbon source	Nonanoic (C)	-0.2
phage	P. putida Sci small MOI 0.1	+0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	+0.2
pH	D-Glucose (C) pH 6.5	+0.2
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.2
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.3
nitrogen source	NAG (N); with MOPS	+0.3
phage	P. putida Sci small MOI 0.1	+0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3
nitrogen source	2,6-diaminopimelic (N)	+0.3
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	+0.3
phage	P. putida Missley MOI 0.1	+0.3
carbon source	ferulate (C); with MOPS	+0.3
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.4
		remove PP_0418