Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0398
temperature shift	Temperature shift 30_to_25; with MOPS	-1.5
pH	Growth at pH7 and (C) D-Glucose	-1.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-1.3
nitrogen source	Urea (N); with MOPS	-1.1
carbon source	Tween 20 (C)	-1.1
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	-1.1
nitrogen source	Ammonium chloride (N)	-1.1
nitrogen source	L-Cysteine (N)	-1.1
nitrogen source	no extra (N)	-1.0
temperature	Growth at 25C; with MOPS	-1.0
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-1.0
carbon source	5-Aminovaleric 10 mM (C)	-1.0
carbon source	Vanillin (C)	-0.9
nitrogen source	nitrate (N)	-0.9
stress	Growth with Chloride 500 mM	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.8
nitrogen source	Hippuric (N)	-0.8
nitrogen source	L-Cysteine (N)	-0.8
pH	D-Glucose (C) pH 6	-0.8
carbon source	carbon source D-Glucose 55.5 mM	-0.8
temperature shift	Temperature shift 10_to_25; with MOPS	+0.8
nitrogen source	Caprolactam (N)	+0.9
nitrogen source	DL-2-Aminobutyric (N)	+0.9
nitrogen source	nitrogen source nitrate 5mM	+0.9
pH	Growth at pH9 and (C) Trisodium citrate	+1.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.1
carbon source	D-Glucose (C)	+1.1
carbon source	4-Hydroxyvalerate (C) (40mM)	+1.2
nitrogen source	nitrogen source nitrite 1mM	+1.5
carbon source	4-Hydroxyvalerate (C) (40mM)	+1.5
		remove PP_0398