Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0372
nitrogen source NAG (N); with MOPS -1.0
pH Growth at pH7 and (C) Trisodium citrate -0.7
phage P. putida Sci small MOI 0.1 -0.6
carbon source Octanoic (C) -0.6
temperature shift Temperature shift 30_to_25; with MOPS -0.6
nitrogen source Urea (N) -0.6
carbon source Delta-Nonalactone (C) -0.6
carbon source Acetate Carbon Source (20mM) -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
nitrogen source Ammonium chloride (N) -0.5
toxin pUC18_phdP1_pSU18T_docP1 -0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -0.4
nitrogen source nitrate (N) -0.4
carbon source D-Glucose (C) -0.4
carbon source DL-2-Aminoadipic 10 mM (C) +0.4
phage P. putida Sci small MOI 0.1 +0.4
pH pH 4 +0.4
carbon source Tween 20 (C) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
carbon source carbon source 4-vinylphenol 0.01 mM +0.5
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.5
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
nitrogen source Propandiamine (N) +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
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PP_0372