Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0353
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -4.6
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -4.4
nitrogen source Propandiamine (N) -1.8
carbon source Acetate Carbon Source (5mM) -1.6
nitrogen source D-2-Aminobutyric (N) -1.5
carbon source Acetate Carbon Source (5mM) -1.2
phage P. putida PUT 7 MOI 1 -0.8
nitrogen source DL-2-Aminobutyric (N) -0.7
pH Valerolactone (C) pH 6.5 -0.6
carbon source D-Glucose (C); with MOPS +0.6
carbon source Crotonic (C) +0.6
pH Growth at pH9 and (C) Trisodium citrate +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7
carbon source propionate (C) +0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.8
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.8
carbon source butyrate (C) +0.8
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.8
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.8
carbon source propionate (C) +0.9
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0
carbon source butyrate (C) +1.2
carbon source butyrate (C) +1.2
carbon source 4-Hydroxyvalerate (C) (40mM) +1.2
carbon source 4-Hydroxyvalerate (C) (40mM) +1.5
carbon source Levulinic Acid (C) +1.6
carbon source Levulinic Acid (C) +1.7
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PP_0353