Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_0329
nitrogen source NAG (N); with MOPS -0.8
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7
pH Growth at pH7 and (C) D-Glucose -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
nitrogen source D-2-Aminobutyric (N) -0.4
carbon source acetate (C) -0.4
pH D-Glucose (C) pH 6 -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4
carbon source Tween 20 (C) -0.4
carbon source D-Glucose (C) -0.4
carbon source carbon source Bisabolene 48.9 mM -0.4
pH pH 4 +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.4
carbon source L-Phenylalanine 5 mM (C) +0.4
temperature Growth at 25C +0.4
carbon source Vanillin (C) +0.4
carbon source D-Glucose (C) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4
phage P. putida Sci small MOI 0.1 +0.5
stress R2A with Fusaric 480 ug/mL +0.5
temperature shift Temperature shift 10_to_25; with MOPS +0.5
phage P. putida Sci Big MOI 0.1 +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
nitrogen source nitrogen source nitrite 1mM +0.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
remove
PP_0329