Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_0324
carbon source Cholinium lysinate (C) -4.0
nitrogen source Carnitine Hydrochloride (N) -3.6
nitrogen source Carnitine Hydrochloride (N) -3.4
nitrogen source Betaine (N) -3.0
nitrogen source Choline chloride (N) -2.5
nitrogen source Betaine (N) -2.5
nitrogen source Choline chloride (N) -2.4
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.2
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7
carbon source Delta-Nonalactone (C) -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.1
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9
micoeukaryotes C.elegans, mixed culture-2 -0.9
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.9
micoeukaryotes C.elegans, mixed culture-1 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8
pH Growth at pH6 and (C) D-Glucose -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7
carbon source benzoic (C) -0.7
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.7
carbon source Delta-Decalactone (C) -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7
carbon source 2-methyl-1-butanol (C) -0.7
carbon source Vanillic Acid (C) -0.7
carbon source L-Lysine 10 mM (C) +1.0
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PP_0324