Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0304
nitrogen source Carnitine Hydrochloride (N) -2.8
nitrogen source Carnitine Hydrochloride (N) -2.8
supernatant Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x -0.8
nitrogen source 2,6-diaminopimelic (N) -0.7
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6
phage P. putida Sci Big MOI 0.1 -0.6
pH Growth at pH6 and (C) Trisodium citrate -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.6
pH Growth at pH6 and (C) D-Glucose -0.6
nitrogen source NAG (N); with MOPS -0.5
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
carbon source Hexanoic (C) -0.5
pH Growth at pH6 and (C) Trisodium citrate -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.5
stress R2A with Fusaric 240 ug/mL -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5
carbon source D-Glucose (C) with 20AA_mix_minus_Cys +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
carbon source ferulate (C); with MOPS +0.5
stress R2A with Fusaric 240 ug/mL +0.5
nitrogen source nitrate (N) +0.6
pH D-Glucose (C) pH 6.5 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6
nitrogen source D-2-Aminobutyric (N) +0.6
pH pH 9 +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9
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PP_0304