Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0302
nitrogen source Carnitine Hydrochloride (N) -2.9
nitrogen source Carnitine Hydrochloride (N) -2.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7
pH Growth at pH7 and (C) Trisodium citrate -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5
carbon source L-Phenylalanine 5 mM (C) -0.4
carbon source acetate (C) -0.4
carbon source Sebacic (C) -0.4
carbon source L-Leucine (C) -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
temperature shift Temperature shift 30_to_25; with MOPS -0.3
nitrogen source Urea (N) -0.3
phage P. put South MOI 10 -0.3
pH pH 7 +0.3
carbon source ferulate (C); with MOPS +0.3
temperature shift Temperature shift 10_to_30 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
pH Growth at pH6 and (C) D-Glucose +0.4
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4
nitrogen source Propiolactam (N) +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4
nitrogen source nitrate (N) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4
carbon source 2,3-Butanediol (C) +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
phage P. putida PUT 7 MOI 1 +0.4
pH pH 8 +0.4
mixed community control Putida_ML5X alone +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6
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PP_0302