Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0301
nitrogen source Carnitine Hydrochloride (N) -3.4
nitrogen source Carnitine Hydrochloride (N) -2.6
carbon source Valeric (C) -1.3
pH Growth at pH6 and (C) D-Glucose -1.2
carbon source Valerolactone (C) -1.0
nitrogen source nitrate (N) -1.0
temperature Growth at 34C -0.7
phage P. putida Missley MOI 0.1 -0.7
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6
phage P. putida Sci small MOI 0.1 -0.6
carbon source 1,4-Butanediol (C) -0.6
pH Growth at pH6 and (C) D-Glucose -0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
carbon source L-Leucine (C) -0.6
pH D-Glucose (C) pH 6 -0.6
nitrogen source Urea (N) -0.6
stress Growth with Chloride 500 mM; with MOPS -0.6
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5
nitrogen source nitrate (N) +0.5
carbon source carbon source 4-vinylphenol 0.1 mM +0.6
temperature shift Temperature shift 30_to_21; with MOPS +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6
nitrogen source nitrogen source nitrite 1mM +0.6
carbon source carbon source 4-vinylphenol 0.01 mM +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6
nitrogen source D-2-Aminobutyric (N) +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.0
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PP_0301