Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0286
phage PUT 8 MOI 1 -1.0
phage PUT8 MOI 0.1 -0.7
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7
temperature Growth at 30C; with MOPS -0.6
carbon source 3-methyl-1-butanol (C) -0.6
phage P. putida South MOI 1 -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5
phage P. put South MOI 0.1 -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.5
phage P. put PUT 10 MOI 0.1 -0.5
phage P. putida PUT10 MOI 1 -0.5
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5
nitrogen source NAG (N); with MOPS -0.5
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5
carbon source L-Lysine (C) -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.5
carbon source carbon source 4-vinylphenol 0.1 mM -0.5
phage P. putida PUT10 MOI 1 -0.5
phage P. put PUT 10 MOI 10 -0.5
no stress control Growth with no stress -0.5
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5
carbon source Lignin Monomers (C) +0.5
pH Growth at pH7 and (C) D-Glucose +0.5
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
carbon source Lignin Monomers (C) +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6
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PP_0286