Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0280
carbon source	Trisodium citrate (C)	-1.5
carbon source	5-Aminovaleric 10 mM (C)	-0.9
carbon source	3-methyl-1-butanol (C)	-0.8
carbon source	3-methyl-1-butanol (C)	-0.8
carbon source	Tween 20 (C)	-0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.7
pH	Growth at pH7 and (C) D-Glucose	-0.7
stress	Geraniol 1 vol%	-0.7
nitrogen source	L-Ornithine (N)	-0.6
nitrogen source	L-Glutamic (N)	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
carbon source	Lauric (C)	-0.6
temperature shift	Temperature shift 10_to_25	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
carbon source	L-Lysine (C)	+0.6
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	+0.6
pH	Valerolactone (C) pH 6.5	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.7
supernatant	LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter	+0.7
nitrogen source	Ammonium chloride (N)	+0.7
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+0.7
micoeukaryotes	C.elegans, mixed culture-2	+0.7
dilutelb	LB 0.1x with 55.5 mM D-Glucose	+0.8
nitrogen source	nitrogen source nitrite 1mM	+0.8
carbon source	L-Lysine 10 mM (C)	+0.8
nitrogen source	Propandiamine (N)	+1.0
nitrogen source	Propandiamine (N)	+1.1
		remove PP_0280