Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0261
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-3.7
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-3.7
carbon source	carbon source D-Glucose 55.5 mM	-3.5
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-3.4
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO.	-3.3
reactor	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-3.3
reactor_pregrowth	Adaptation in M9 media timecourse 3; day 3	-3.2
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-3.2
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-3.0
carbon source	L-Valine (C)	-3.0
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	-2.6
carbon source	M9 minimal media_noCarbon with D-Glucose 10 mM; 30C; then outgrowth in LB	-2.6
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	-2.5
carbon source	carbon source Glycerol 108.6 mM	-2.4
carbon source	M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB	-2.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.3
nitrogen source	nitrogen source nitrate 5mM	-2.2
reactor_pregrowth	Adaptation in M9 media timecourse 1; day 3	-2.2
carbon source	carbon source Bisabolene 48.9 mM	-2.2
carbon source	4-Hydroxyvalerate (C) (40mM)	-2.2
carbon source	L-Valine (C)	-2.2
carbon source	carbon source Bisabolol 45 mM	-2.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-2.1
reactor_pregrowth	Adaptation in M9 media timecourse 2; day 3	-2.1
carbon source	carbon source 4-vinylphenol 0.01 mM	-2.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.1
nitrogen source	L-Leucine (N)	-2.1
carbon source	4-Hydroxyvalerate (C) (40mM)	-2.0
nitrogen source	DL-2-Aminobutyric (N)	+3.4
nitrogen source	DL-2-Aminobutyric (N)	+3.5
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