Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0259
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
carbon source	L-Leucine (C)	-0.7
carbon source	Delta-Nonalactone (C)	-0.7
phage	P. put South MOI 10	-0.7
nitrogen source	2,6-diaminopimelic (N)	-0.6
phage	P. putida Sci Big MOI 0.1	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.5
nitrogen source	NAG (N); with MOPS	-0.5
nitrogen source	DL-2-Aminobutyric (N)	-0.5
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM	-0.5
phage	P. put PUT 10 MOI 0.1	-0.4
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	-0.4
carbon source	1,3-Hexanediol (C)	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
temperature shift	Temperature shift 30_to_4; with MOPS	-0.4
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.4
carbon source	carbon source 4-vinylphenol 0.1 mM	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
stress	Growth with Chloride 200 mM; with MOPS	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.4
dilutelb	LB 0.1x with 55.5 mM D-Glucose	+0.4
pH	pH 9	+0.5
pH	Growth at pH8 and (C) D-Glucose	+0.5
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.5
carbon source	D-Glucose (C); with MOPS	+0.5
carbon source	L-Leucine (C)	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.1
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.7
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