Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0257
carbon source Delta-Nonalactone (C) -1.7
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2
phage P. putida Sci small MOI 0.1 -1.2
carbon source BC Lignin Sorghum 20 vol% (C) -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0
pH pH 5 -1.0
temperature shift Temperature shift 30_to_21; with MOPS -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9
carbon source rac-3-Hydroxypentanoic Acid (C) -0.9
phage P. putida Sci Big MOI 0.1 -0.9
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9
carbon source Vanillin (C) -0.8
micoeukaryotes C.elegans, mixed culture-2 -0.8
nitrogen source NAG (N); with MOPS -0.8
carbon source 3-Hydroxyhexanoic (C) -0.8
carbon source BC Lignin Sorghum 10 vol% (C) -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8
carbon source D-Glucose (C); with MOPS -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8
pH Growth at pH6 and (C) D-Glucose -0.7
carbon source L-Proline (C) +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
pH Growth at pH6 and (C) D-Glucose +0.9
nitrogen source D-2-Aminobutyric (N) +1.0
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1
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PP_0257