Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0236
nitrogen source	Propandiamine (N)	-2.7
carbon source	L-Lysine (C)	-2.5
carbon source	Tween 20 (C)	-2.1
nitrogen source	nitrogen source nitrite 0.5mM	-2.1
pH	D-Glucose (C) pH 6	-1.7
stress	R2A with Fusaric 480 ug/mL	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.7
carbon source	Delta-Nonalactone (C)	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.6
phage	P. putida Sci Big MOI 0.1	-1.5
nitrogen source	nitrogen source Ammonium chloride 20mM	-1.5
nitrogen source	nitrate (N)	-1.5
carbon source	D-Fructose (C)	-1.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-1.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.4
stress	R2A with Fusaric 240 ug/mL	-1.4
temperature shift	Temperature shift 10_to_30; with MOPS	-1.4
carbon source	L-tyrosine 5 mM (C)	-1.3
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-1.3
carbon source	D-Galacturonic Acid (C)	-1.3
carbon source	rac-3-Hydroxypentanoic Acid (C)	-1.3
nitrogen source	NAG (N); with MOPS	+1.3
carbon source	Butanol (C)	+1.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.4
nitrogen source	D-2-Aminobutyric (N)	+1.4
pH	pH 6	+1.8
carbon source	carbon source 3-O-methyl-glucose 10 mM	+1.8
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	+1.8
pH	pH 4	+2.0
carbon source	carbon source Bisabolene 48.9 mM	+2.1
		remove PP_0236