Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0206
carbon source	D-Glucose (C)	-3.5
pH	Growth at pH6 and (C) D-Glucose	-2.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-2.6
carbon source	Valerolactone (C)	-2.2
temperature shift	Temperature shift 30_to_25; with MOPS	-1.9
temperature shift	Temperature shift 30_to_34; with MOPS	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.6
carbon source	Tween 20 (C)	-1.3
carbon source	4-Methyl-2-oxopentanoic (C)	-1.3
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-1.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3
nitrogen source	Propandiamine (N)	-1.2
pH	Growth at pH8 and (C) D-Glucose	-1.2
temperature	Growth at 25C	-1.0
nitrogen source	D-2-Aminobutyric (N)	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
nitrogen source	no extra (N); with MOPS	-0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8
phage	P. putida Sci small MOI 0.1	-0.8
stress	Growth with Chloride 200 mM	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
carbon source	4-Aminobutyric 10 mM (C)	+0.8
pH	pH 5	+0.9
nitrogen source	nitrogen source nitrite 1mM	+0.9
pH	Valerolactone (C) pH 6.5	+1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+1.1
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+1.1
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3
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