Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0192
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
temperature shift Temperature shift 30_to_25 -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
nitrogen source nitrate (N) -0.6
carbon source D-Glucose (C) -0.5
carbon source L-Phenylalanine 5 mM (C) -0.5
pH Growth at pH9 and (C) Trisodium citrate -0.5
lb outgrowth control LB outgrowth control -0.5
temperature shift Temperature shift 30_to_25; with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5
nitrogen source NAG (N) -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
carbon source 1,4-Butanediol (C) +0.5
temperature Growth at 25C +0.5
carbon source 1,4-Butanediol (C) +0.5
carbon source 1,3-Hexanediol (C) +0.5
carbon source ferulate (C); with MOPS +0.5
carbon source 1,3-Hexanediol (C) +0.5
pH pH 9 +0.5
carbon source L-Lysine (C) +0.6
carbon source 4-Hydroxyvalerate (C) (40mM) +0.7
micoeukaryotes C.elegans, mixed culture-1 +0.7
nitrogen source D-2-Aminobutyric (N) +0.8
carbon source 4-Hydroxyvalerate (C) (40mM) +0.8
micoeukaryotes C.elegans, mixed culture-2 +0.8
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.9
micoeukaryotes Dictyostellum sp.mixed culture-1 +1.0
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PP_0192