Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0191
nitrogen source 2,6-diaminopimelic (N) -4.0
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.2
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.0
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5
pH Growth at pH6 and (C) Trisodium citrate -1.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.4
nitrogen source D-2-Aminobutyric (N) -1.4
carbon source L-Leucine (C) -1.3
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2
nitrogen source Propiolactam (N) +1.3
micoeukaryotes Dictyostellum sp.mixed culture-2 +1.3
micoeukaryotes C.elegans, mixed culture-2 +1.3
carbon source 1,3-Hexanediol (C) +1.4
nitrogen source nitrite (N) +1.4
carbon source D-Glucose (C) with 20AA_mix_minus_Thr +1.4
carbon source 3-methyl-2-oxopentanoic (C) +1.4
carbon source 1,3-Hexanediol (C) +1.4
nitrogen source L-Methionine (N) +1.7
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.7
carbon source 1,4-Butanediol (C) +1.9
carbon source 1,4-Butanediol (C) +2.0
carbon source L-Lysine 10 mM (C) +2.0
carbon source 4-Hydroxyvalerate (C) (40mM) +2.6
carbon source 4-Hydroxyvalerate (C) (40mM) +2.8
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PP_0191