Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_0188
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-3.1
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-2.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.1
nitrogen source	Propandiamine (N)	-1.4
phage	P. putida Sci small MOI 0.1	-1.4
phage	P. putida PUT 7 MOI 1	-1.3
carbon source	L-Leucine (C)	-1.2
pH	pH 4	-1.2
carbon source	Delta-Dodecalactone (C)	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.1
carbon source	Glutaric (C)	-1.1
carbon source	D-Glucose (C) with 20AA_mix_minus_Thr	-1.0
carbon source	DL-3-Hydroxybutyric (C)	-0.9
nitrogen source	Ethanolamine (N)	-0.9
carbon source	D-Glucaric (C)	-0.9
carbon source	1,3-Hexanediol (C)	-0.9
carbon source	Delta-Decalactone (C)	-0.9
nitrogen source	nitrate (N)	-0.8
pH	pH 9	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	Mucic (C)	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.8
nitrogen source	DL-2-Aminobutyric (N)	+0.8
carbon source	Valerolactam 10 mM (C)	+1.0
carbon source	ferulate (C); with MOPS	+1.1
nitrogen source	D-2-Aminobutyric (N)	+1.1
nitrogen source	D-2-Aminobutyric (N)	+1.7
		remove PP_0188