Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0163
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0
nitrogen source L-Leucine (N) -0.9
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8
nitrogen source Propandiamine (N) -0.7
nitrogen source L-Leucine (N) -0.7
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.7
carbon source 1,3-Butandiol (C) -0.7
nitrogen source Propiolactam (N) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6
carbon source Trisodium citrate (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
carbon source Oleic (C) +0.6
carbon source 5-Hydroxydodecanoate (C) +0.6
carbon source D-Glucuronic Acid (C) +0.7
nitrogen source D-2-Aminobutyric (N) +0.7
carbon source 5-Hydroxydodecanoate (C) +0.7
carbon source 4-Hydroxyvalerate (C) (40mM) +0.7
phage P. putida PUT 7 MOI 1 +0.7
carbon source Levulinic Acid (C) +0.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8
carbon source Levulinic Acid (C) +0.8
carbon source Delta-Nonalactone (C) +0.8
carbon source Ethyl decanoate (C) +0.9
carbon source Ethyl decanoate (C) +0.9
nitrogen source D-2-Aminobutyric (N) +1.1
phage P. putida Missley MOI 0.1 +1.2
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2
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PP_0163