Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0123
carbon source 3-methyl-1-butanol (C) -3.4
carbon source 3-methyl-1-butanol (C) -3.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.0
stress Formaldehyde 0.03125 vol% -2.8
carbon source BC Lignin Sorghum 20 vol% (C) -2.8
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.7
stress LB_noSalt with Chloride 1100 mM -2.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.5
stress LB_noSalt with Chloride 1100 mM -2.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.3
carbon source Lignin Monomers (C) -2.1
carbon source BC Lignin Sorghum 10 vol% (C) -2.0
nitrogen source nitrogen source nitrite 0.5mM -2.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.0
carbon source Lignin Monomers (C) -2.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.9
phage P. putida PUT10 MOI 1 +1.9
phage P. put South MOI 0.1 +1.9
phage P. put PUT 10 MOI 10 +2.0
phage P. putida PUT10 MOI 10 +2.0
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +2.1
phage P. put PUT 10 MOI 10 +2.1
phage P. put South MOI 1 +2.1
phage P. put South MOI 1 +2.2
phage P. putida PUT10 MOI 10 +2.2
phage P. putida South MOI 0.1 +2.4
phage P. putida South MOI 1 +2.4
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +2.4
phage P. putida South MOI 0.1 +2.4
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PP_0123