Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0118
carbon source	carbon source D-Glucose 55.5 mM	-2.6
carbon source	carbon source Bisabolene 48.9 mM	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.5
nitrogen source	Hippuric (N)	-1.4
carbon source	Ferulic Acid (C)	-1.4
carbon source	carbon source Bisabolol 45 mM	-1.4
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-1.4
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-1.4
carbon source	Vanillin (C)	-1.3
nitrogen source	D-2-Aminobutyric (N)	-1.3
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-1.2
carbon source	DL-2-Aminoadipic 10 mM (C)	-1.2
carbon source	Vanillic Acid (C)	-1.2
carbon source	ferulate (C); with MOPS	-1.1
carbon source	Vanillin (C)	-1.1
carbon source	Ferulic Acid (C)	-1.1
phage moi 100	Time6-phageFRS	-1.0
nitrogen source	Hippuric (N)	-1.0
phage	P. putida South MOI 10	-1.0
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-1.0
carbon source	L-Glutamine (C)	+1.2
carbon source	Delta-Nonalactone (C)	+1.4
nitrogen source	DL-2-Aminobutyric (N)	+1.6
carbon source	L-Leucine (C)	+2.0
nitrogen source	DL-2-Aminobutyric (N)	+2.0
carbon source	L-Leucine (C)	+2.1
carbon source	L-Leucine (C)	+2.8
		remove PP_0118