Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0113
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-1.7
carbon source	carbon source 4-vinylphenol 0.01 mM	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	Lignin Monomers (C)	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
dilutelb	LB 0.1x with 55.5 mM D-Glucose	-0.6
pH	D-Glucose (C) pH 6	-0.6
phage moi 100	Time6-phageFRS	-0.6
carbon source	butyrate (C)	-0.6
carbon source	Lignin Monomers (C)	-0.6
pH	Growth at pH8 and (C) D-Glucose	-0.6
r2a control	R2A control	-0.6
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.6
carbon source	Glucose (C) (40mM)	-0.5
pH	pH 9	-0.5
pH	Growth at pH9 and (C) Trisodium citrate	+0.5
pH	Growth at pH6 and (C) Trisodium citrate	+0.6
pH	Growth at pH6 and (C) Trisodium citrate	+0.6
temperature	Growth at 25C	+0.6
carbon source	D-Glucose (C); with MOPS	+0.6
nitrogen source	Urea (N)	+0.6
pH	Growth at pH7 and (C) D-Glucose	+0.6
pH	Growth at pH7 and (C) Trisodium citrate	+0.7
phage	P. putida Missley MOI 0.1	+0.7
carbon source	Crotonic (C)	+0.7
nitrogen source	2,6-diaminopimelic (N)	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
temperature shift	Temperature shift 30_to_21; with MOPS	+0.9
carbon source	ferulate (C); with MOPS	+1.1
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