Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0110
pH Growth at pH6 and (C) D-Glucose -1.0
pH pH 6 -0.6
nitrogen source Ammonium chloride (N); with MOPS -0.6
temperature Growth at 25C; with MOPS -0.5
pH Growth at pH6 and (C) D-Glucose -0.5
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5
phage P. putida PUT10 MOI 1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
nitrogen source no extra (N); with MOPS -0.5
temperature shift Temperature shift 10_to_25; with MOPS -0.5
stress Growth with Chloride 500 mM; with MOPS -0.5
phage P. putida PUT10 MOI 10 -0.5
nitrogen source Ammonium chloride (N) -0.4
pH Growth at pH6 and (C) D-Glucose -0.4
pH Valerolactone (C) pH 6.5 -0.4
no stress control Growth with no stress -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.4
pH pH 4 -0.4
temperature Growth at 30C; with MOPS -0.4
pH Growth at pH6 and (C) Trisodium citrate -0.4
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.4
carbon source 2,3-Butanediol (C) -0.4
carbon source Valerolactone (C) -0.4
phage P. putida PUT 7 MOI 1 +0.4
carbon source Tween 20 (C) +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
pH Growth at pH7 and (C) D-Glucose +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5
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PP_0110