Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_0089
phage P. putida Sci small MOI 0.1 -1.3
carbon source acetate (C) -1.1
pH Growth at pH6 and (C) D-Glucose -1.1
carbon source D-Glucose (C); with MOPS -1.0
carbon source Myristic (C) -0.9
nitrogen source 2,6-diaminopimelic (N) -0.8
pH Growth at pH6 and (C) Trisodium citrate -0.8
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.8
carbon source Tween 20 (C) -0.8
no stress control Growth with no stress -0.7
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7
stress Growth with Chloride 200 mM -0.7
nitrogen source nitrogen source nitrate 5mM -0.7
temperature shift Temperature shift 30_to_10; with MOPS -0.7
temperature Growth at 25C; with MOPS -0.7
carbon source Trisodium citrate (C) -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.6
nitrogen source no extra (N) -0.6
carbon source L-Phenylalanine 5 mM (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
carbon source D-Glucose (C) 2.5 mM -0.6
phage P. put South MOI 10 -0.5
pH Growth at pH6 and (C) Trisodium citrate -0.5
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.6
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.6
carbon source D-Glucose (C); with MOPS +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6
toxin pUC18_phdP1_pSU18T_docP1 +0.6
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.6
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PP_0089