Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0086
carbon source Tween 20 (C) -5.5
nitrogen source NAG (N); with MOPS -2.8
pH Growth at pH6 and (C) D-Glucose -2.2
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.0
nitrogen source nitrate (N) -1.7
temperature shift Temperature shift 30_to_4 -1.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -1.6
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.6
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.6
carbon source Valerolactone (C) -1.5
phage P. putida Missley MOI 0.1 -1.5
carbon source Vanillin (C) -1.4
carbon source rac-3-Hydroxypentanoic Acid (C) -1.3
nitrogen source Urea (N) -1.3
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3
pH Valerolactone (C) pH 6.5 -1.3
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3
carbon source carbon source Bisabolol 45 mM +1.3
carbon source carbon source 4-vinylphenol 0.1 mM +1.6
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.8
carbon source carbon source Glycerol 108.6 mM +1.8
carbon source carbon source 2-Deoxy-D-glucose 100 mM +1.9
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +2.0
carbon source carbon source 2-Deoxy-D-glucose 10 mM +2.1
pH pH 4 +2.2
pH pH 6 +2.5
carbon source carbon source 4-vinylphenol 0.01 mM +2.6
pH pH 8 +2.7
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PP_0086