Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0077
nitrogen source	NAG (N); with MOPS	-0.5
carbon source	Crotonic (C)	-0.4
carbon source	D-Glucose (C)	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
pH	Growth at pH9 and (C) Trisodium citrate	-0.4
carbon source	ferulate (C); with MOPS	-0.4
nitrogen source	nitrate (N)	-0.4
carbon source	carbon source D-Glucose 55.5 mM	-0.3
phage	P. put PUT 10 MOI 10	-0.3
nitrogen source	nitrogen source nitrite 1mM	-0.3
pH	Growth at pH7 and (C) Trisodium citrate	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.3
nitrogen source	Propiolactam (N)	-0.3
pH	Growth at pH6 and (C) D-Glucose	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.3
nitrogen source	2,6-diaminopimelic (N)	-0.3
temperature shift	Temperature shift 30_to_25	-0.3
carbon source	D-Glucose (C)	-0.3
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.3
no stress control	Growth with no stress	-0.3
micoeukaryotes	C.elegans, mixed culture-2	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.3
phage	P. putida Sci small MOI 0.1	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
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