Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0062
carbon source	Trisodium citrate (C)	-1.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.7
carbon source	butyrate (C)	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.9
temperature shift	Temperature shift 10_to_34; with MOPS	-0.8
pH	Growth at pH9 and (C) Trisodium citrate	-0.8
carbon source	carbon source Bisabolene 48.9 mM	-0.8
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	-0.8
temperature shift	Temperature shift 10_to_30	-0.8
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
carbon source	Hexanoic (C)	-0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.7
phage	P. putida Sci small MOI 0.1	-0.7
carbon source	carbon source D-Glucose 55.5 mM	-0.7
pH	pH 8	-0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	+0.7
carbon source	Acetate Carbon Source (5mM)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
nitrogen source	Propiolactam (N)	+0.7
phage	P. putida South MOI 1	+0.7
pH	Growth at pH6 and (C) Trisodium citrate	+0.7
dilutelb	LB 0.1x with 55.5 mM D-Glucose	+0.8
reactor	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	+0.8
nitrogen source	NAG (N); with MOPS	+0.8
nitrogen source	Ammonium chloride (N)	+0.9
phage	P. putida South MOI 0.1	+0.9
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