Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0058
carbon source 2,3-Butanediol (C) -2.0
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.9
carbon source L-Glutamic (C) -1.6
micoeukaryotes C.elegans, mixed culture-1 -1.6
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.6
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3
nitrogen source DL-2-Aminobutyric (N) -1.3
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3
stress Geraniol 1 vol% -1.3
nitrogen source DL-2-Aminobutyric (N) -1.2
micoeukaryotes C.elegans, mixed culture-2 -1.1
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.1
carbon source L-Glutamic (C) -1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.0
phage P. putida PUT10 MOI 1 +1.0
stress 1-Pentanol 0.3 vol% +1.0
carbon source L-Valine (C) +1.1
temperature shift Temperature shift 30_to_4; with MOPS +1.1
carbon source L-Valine (C) +1.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1
stress 3-methyl-3-butenol (pure) 0.25 vol% +1.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.2
stress Butanol 0.6 vol% +1.4
carbon source Delta-Nonalactone (C) +1.6
carbon source Lignin Monomers (C) +2.7
carbon source Lignin Monomers (C) +3.4
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PP_0058