Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0025
carbon source	D-Glucose (C); with MOPS	-5.2
nitrogen source	Urea (N)	-5.2
carbon source	butyrate (C)	-4.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-4.5
carbon source	D-Galacturonic Acid (C)	-4.3
carbon source	Valerolactone (C)	-3.2
pH	Growth at pH7 and (C) D-Glucose	-3.1
temperature shift	Temperature shift 10_to_25; with MOPS	-2.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-2.9
carbon source	Crotonic (C)	-2.6
pH	Growth at pH6 and (C) D-Glucose	-2.6
carbon source	2,3-Butanediol (C)	-2.6
carbon source	ferulate (C); with MOPS	-2.6
temperature shift	Temperature shift 10_to_34; with MOPS	-2.5
phage	P. putida Sci Big MOI 0.1	-2.4
carbon source	L-Leucine (C)	-2.4
pH	Growth at pH6 and (C) Trisodium citrate	-2.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.3
pH	Growth at pH9 and (C) Trisodium citrate	-2.1
nitrogen source	NAG (N); with MOPS	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.1
toxin	pUC18_phdP1_pSU18T_docP1	-2.0
carbon source	Sebacic (C)	-2.0
carbon source	Heptanoic (C)	-2.0
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-2.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-1.9
carbon source	D-Glucose (C)	-1.8
nitrogen source	no extra (N); with MOPS	-1.8
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+1.9
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+3.0
		remove PP_0025