Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0003
pH Growth at pH7 and (C) D-Glucose -4.0
temperature shift Temperature shift 30_to_25 -3.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4
pH Growth at pH6 and (C) D-Glucose -2.2
nitrogen source Urea (N); with MOPS -2.2
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1
temperature Growth at 30C; with MOPS -2.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.0
nitrogen source NAG (N); with MOPS -2.0
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.9
carbon source carbon source D-Glucose 55.5 mM -1.8
carbon source 4-Methyl-2-oxopentanoic (C) -1.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.8
pH Growth at pH6 and (C) Trisodium citrate -1.8
carbon source D-Glucose (C) -1.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.8
phage P. putida Sci Big MOI 0.1 -1.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.8
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.7
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.7
carbon source Delta-Undecalactone (C) -1.6
phage P. put PUT 10 MOI 10 +1.7
phage P. putida South MOI 1 +1.7
phage P. put PUT 10 MOI 10 +2.1
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PP_0003