Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_00485
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
soil	soil sample 6; outgrowth in LB	-1.1
carbon source	D-Glucosamine Hydrochloride (C)	-1.0
carbon source	D-Trehalose (C)	-1.0
stress	Doxycycline hyclate 0.001 mg/ml	-1.0
carbon source	Uridine (C)	-1.0
solid stress	Fraxetin 3 mM; solid stress	-0.9
liquid stress	80% Methanol 2 mM; liquid stress	-0.8
soil	soil sample 3; outgrowth in LB	-0.8
solid stress	80% Methanol 3 mM; solid stress	-0.8
carbon source	D-Lactate (C)	-0.8
carbon source	L-Valine (C)	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
stress	6-methoxy-2(3H)-benzoxazolone 0.5 mM	-0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
nitrogen source	Cytidine (N)	-0.8
stress	R2A with Fusaric 120 ug/mL	-0.7
carbon source	D-Glucose-6-Phosphate (C)	-0.7
carbon source	Glycerol (C)	-0.7
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.7
carbon source	Cytidine (C)	-0.7
carbon source	Gly-Glu (C)	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-tyrosine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.0
phage	P. simiae OR Antrim MOI 1	+1.1
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