Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_04730
phage	P. simiae OR Antrim MOI 10	-0.8
soil	soil sample 3; outgrowth in LB	-0.7
carbon source	Carbon source D-Mannitol 5 mM	-0.7
phage	P. simiae OR Antrim MOI 1	-0.7
phage	P. simiae ORA MOI 0.1	-0.6
motility	outer cut, LB soft agar motility assay	-0.5
phage	P. simiae Grant Run MOI 10	-0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.5
phage	P. simiae OR Antrim MOI 1	-0.5
carbon source	NAG (C)	-0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4
motility	inner cut, LB soft agar motility assay	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4
phage	JP1 MOI 1	-0.4
no phage control	Time6-nophage	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.4
carbon source	Trisodium citrate (C)	+0.5
ecofab	LB in EcoFAB_3.5mL	+0.5
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.5
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.6
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+0.6
carbon source	2'-Deoxyinosine 5 mM (C)	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
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