Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_04315
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.2
phage	P. simiae OR Antrim MOI 0.1	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
phage	P. simiae ORA MOI 0.1	-0.8
carbon source	L-Isoleucine (C)	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7
phage	P. simiae OR Antrim MOI 10	-0.7
carbon source	D-Glucose (C)	-0.7
motility	inner cut, LB soft agar motility assay	-0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7
motility	inner cut, LB soft agar motility assay	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
stress	1-ethyl-3-methylimidazolium acetate 35 mM	-0.6
carbon source	Uridine (C)	-0.6
carbon source	D-Glucosamine Hydrochloride (C)	-0.6
carbon source	octanoate (C)	-0.6
phage	P. simiae Grant Run MOI 0.1	-0.6
phage	P. simiae ORA MOI 10	-0.6
motility	outer cut, LB soft agar motility assay	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
carbon source	Trisodium citrate (C)	+0.6
soil	soil sample 2; outgrowth in LB	+0.6
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2
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