Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_04220
carbon source	L-Leucine (C)	-4.7
rhizosphere	rhizosphere sample 1; outgrowth in LB	-2.5
root	root sample 6; outgrowth in LB	-2.4
carbon source	L-Valine (C)	-2.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-2.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.9
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-1.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-1.6
stress	Doxycycline hyclate 0.001 mg/ml	-1.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.6
soil	soil sample 6; outgrowth in LB	-1.5
solid stress	Fraxetin 3 mM; solid stress	-1.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.5
soil	soil sample 5; outgrowth in LB	-1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.4
stress	R2A with Fusaric 120 ug/mL	-1.3
carbon source	D-Fructose (C)	-1.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.2
carbon source	succinate (C)	-1.2
nophagecontrol	Only library	-1.2
phage	P. simiae OR1 MOI 0.1	-1.2
phage	P. simiae Grant Run MOI 0.1	+1.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+3.2
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