Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_03540
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5
stress	Phosphomycin 0.001 mg/ml	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3
stress	Neomycin 0.04 mg/ml	-0.3
carbon source	2-Deoxy-D-ribonic lithium salt (C)	+0.3
motility	inner cut, LB soft agar motility assay	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
soil	soil sample 4; outgrowth in LB	+0.3
liquid stress	Fraxetin 3 mM; liquid stress	+0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
phage	Wcs_0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
supernatant control	Vogels_fungal_media; pH 5.5	+0.3
phage	P. simiae Grant Run MOI 10	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
seeds	Growth on radish seeds for 24 hours	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.4
root	root sample 6; outgrowth in LB	+0.4
stress	Gentamicin 0.008 mg/ml	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
phage	P. simiae OR Antrim MOI 10	+0.4
stress	methylglyoxal 0.032 vol%	+0.5
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.5
seeds	Growth on radish seeds for 72 hours	+0.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.7
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.7
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