Fitness for 1 genes in Pseudomonas simiae WCS417

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions

Group Condition PS417_00305
soil soil sample 4; outgrowth in LB -1.4
soil soil sample 8; outgrowth in LB -1.4
soil soil sample 6; outgrowth in LB -1.3
soil soil sample 5; outgrowth in LB -1.3
soil soil sample 2; outgrowth in LB -1.2
soil soil sample 3; outgrowth in LB -1.1
rhizosphere rhizosphere sample 8; outgrowth in LB -1.1
rhizosphere rhizosphere sample 2; outgrowth in LB -1.1
root root sample 6; outgrowth in LB -1.0
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9
soil soil sample 7; outgrowth in LB -0.9
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7
carbon source 2'-Deoxyinosine 5 mM (C) -0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
carbon source 2'-Deoxyinosine 5 mM (C) -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4
supernatant control Vogels_fungal_media; pH 5.5 -0.4
agar plate interaction control Taped volatile agar plate with no fungus -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3
stress Gentamicin 0.008 mg/ml -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
phage P. simiae OR Antrim MOI 1 +0.4
remove
PS417_00305