Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_03025
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.6
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.6
soil	soil sample 2; outgrowth in LB	-0.6
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.5
soil	soil sample 5; outgrowth in LB	-0.5
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
carbon source	RCH2_defined_glucose with MS_media 1x	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-0.5
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	-0.5
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
solid stress	80% Methanol 3 mM; solid stress	+0.5
solid stress	Scopoletin 2 mM; solid stress	+0.5
solid stress	Fraxetin 0.5 mM; solid stress	+0.5
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+0.5
solid stress	80% Methanol 2 mM; solid stress	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.6
carbon source	2'-Deoxyinosine 5 mM (C)	+0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
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