Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_02990
solid stress	Fraxetin 3 mM; solid stress	-4.9
soil	soil sample 3; outgrowth in LB	-3.0
soil	soil sample 6; outgrowth in LB	-2.1
solid stress	Fraxetin 3 mM; solid stress	-1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.3
solid stress	Fraxetin 2 mM; solid stress	-1.2
soil	soil sample 4; outgrowth in LB	-1.2
solid stress	Scopoletin 2 mM; solid stress	-1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1
solid stress	Fraxetin 3 mM; solid stress	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9
liquid stress	80% Methanol 1 mM; liquid stress	-0.9
stress	LB_noSalt with Chloride 1100 mM	-0.9
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.8
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
solid stress	Scopoletin 2 mM; solid stress	-0.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.8
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.9
seeds	Growth on radish seeds for 72 hours	+0.9
agar plate interaction control	Taped volatile agar plate with no fungus	+0.9
phage	P. simiae ORA MOI 0.1	+0.9
phage	P. simiae Grant Run MOI 10	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.0
phage	P. simiae OR Antrim MOI 10	+1.3
root	root sample 6; outgrowth in LB	+1.4
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