Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_28435
phage	P. simiae OR1 MOI 0.1	-0.5
carbon source	acetate (C)	-0.4
stress	methylglyoxal 0.032 vol%	-0.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.3
carbon source	Trisodium citrate (C)	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3
phage	JP1 MOI 10	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3
phage	Wcs_1	-0.3
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.3
stress	Cobalt chloride 0.16 mM	-0.3
carbon source	Ethanol (C)	-0.3
stress	Polymyxin B sulfate 0.006 mg/ml	-0.3
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.3
motility	outer cut, LB soft agar motility assay	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2
phage	P. simiae OR Antrim MOI 0.1	-0.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.2
phage	P. simiae Grant Run MOI 10	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2
liquid stress	Scopoletin 3 mM; liquid stress	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
soil	soil sample 5; outgrowth in LB	+0.3
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