Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27930
carbon source	NAG (C)	-1.1
carbon source	NAG (C)	-0.9
carbon source	L-Citrulline (C)	-0.7
root	root sample 6; outgrowth in LB	-0.7
carbon source	Carbon source L-Ornithine 10 mM	-0.7
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6
carbon source	L-Alanine (C)	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
phage	P. simiae OR Antrim MOI 0.1	-0.5
carbon source	Carbon source L-Citrulline 5 mM	-0.5
carbon source	Carbon source L-Ornithine 5 mM	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4
carbon source	D-Alanine (C)	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.4
motility	inner cut, LB soft agar motility assay	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
soil	soil sample 8; outgrowth in LB	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
phage	P. simiae ORA MOI 0.1	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
phage	JP1 MOI 10	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
phage	P. simiae Grant Run MOI 10	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8
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