Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_02745
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4
soil	soil sample 2; outgrowth in LB	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
solid stress	Fraxetin 3 mM; solid stress	-0.8
stress	L-Lysine 60 mM	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8
agar plate interaction control	Taped volatile agar plate with no fungus	+0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.9
phage	P. simiae OR Antrim MOI 10	+0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
liquid stress	Scopoletin 1 mM; liquid stress	+0.9
liquid stress	80% Methanol 0.5 mM; liquid stress	+0.9
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.0
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.1
phage	JP1 MOI 10	+1.2
agar plate interaction control	Taped volatile agar plate with no fungus	+1.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+1.3
seeds	Growth on radish seeds for 72 hours	+1.3
soil	soil sample 7; outgrowth in LB	+1.3
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.6
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