Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27485
ecofab	LB 0.5x in EcoFAB_3.5mL	-1.0
phage	JP1 MOI 0.1	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7
soil	soil sample 2; outgrowth in LB	-0.7
stress	Paraquat dichloride 0.008 mg/ml	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
carbon source	L-Valine (C)	-0.7
seeds	Growth on radish seeds for 72 hours	-0.6
motility	outer cut, LB soft agar motility assay	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
no phage control	Time6-nophage	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
agar plate interaction control	Taped volatile agar plate with no fungus	+0.6
phage	P. simiae Grant Run MOI 10	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7
phage	P. simiae Grant Run MOI 0.1	+0.7
agar plate interaction control	Taped volatile agar plate with no fungus	+0.7
phage	P. simiae OR Antrim MOI 1	+0.8
phage	P. simiae ORA MOI 0.1	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.8
phage	P. simiae OR Antrim MOI 1	+0.8
phage	P. simiae OR1 MOI 0.1	+0.8
phage	P. simiae Grant Run MOI 10	+0.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.5
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