Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27475
carbon source	2'-Deoxyinosine 5 mM (C)	-1.8
seeds	Growth on radish seeds for 24 hours	-1.5
phage	P. simiae ORA MOI 0.1	-1.5
carbon source	2'-Deoxyinosine 5 mM (C)	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
phage	JP1 MOI 0.1	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1
carbon source	Trisodium citrate (C)	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.9
carbon source	2-Deoxy-D-Ribose (C)	+0.9
soil	soil sample 4; outgrowth in LB	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2
phage	P. simiae OR Antrim MOI 10	+1.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.2
soil	soil sample 3; outgrowth in LB	+1.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.4
rhizosphere	rhizosphere sample 2; outgrowth in LB	+1.6
soil	soil sample 5; outgrowth in LB	+2.2
soil	soil sample 7; outgrowth in LB	+2.3
soil	soil sample 6; outgrowth in LB	+2.8
soil	soil sample 8; outgrowth in LB	+3.0
rhizosphere	rhizosphere sample 8; outgrowth in LB	+4.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	+4.2
root	root sample 6; outgrowth in LB	+4.9
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